Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS4

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr7 1 CH_acertr_526 2 3 0.000634436
Camellia sinensis var. sinensis Chr4 1 CH_camsi_194 4 25 0.0000000036575
Capsicum annuum PGAv.1.6.scaffold741 1 CH_can_373 3 40 0.000403491
Manihot esculenta Chromosome15 1 CH_mes_411 2 2 0.000366379
Marchantia polymorpha scaffold_12 1 CH_mpo_73 2 2 0.000110442
Punica granatum NC_045134.1 1 CH_pgr_277 2 2 0.000225107
Sechium edule LG13 1 CH_sed_293 2 2 0.000428052
Solanum lycopersicum SL4.0ch02 1 CH_sly_407 2 2 0.000176082
Solanum pennellii Spenn-ch02 1 CH_spe_29 5 5 1.76154e-16
Acer truncatum chr7 2 CH_acertr_526 2 3 0.000634436
Camellia sinensis var. sinensis Chr4 2 CH_camsi_194 4 25 0.0000000036575
Capsicum annuum PGAv.1.6.scaffold741 2 CH_can_373 3 40 0.000403491
Manihot esculenta Chromosome15 2 CH_mes_411 2 2 0.000366379
Marchantia polymorpha scaffold_12 2 CH_mpo_73 2 2 0.000110442
Punica granatum NC_045134.1 2 CH_pgr_277 2 2 0.000225107
Sechium edule LG13 2 CH_sed_293 2 2 0.000428052
Solanum lycopersicum SL4.0ch02 2 CH_sly_407 2 2 0.000176082
Solanum pennellii Spenn-ch02 2 CH_spe_29 5 5 1.76154e-16

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001