Functional clusters
Information
- Type MapMan
- Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS3
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Eutrema salsugineum | scaffold_10 | 1 | CH_esa_164 | 2 | 2 | 0.0000761499 |
Glycine max | Gm16 | 1 | CH_gma_556 | 2 | 2 | 0.000569336 |
Helianthus annuus | HanXRQChr15 | 1 | CH_han_682 | 2 | 2 | 0.000579643 |
Lonicera japonica | GWHAAZE00000007 | 1 | CH_lonja_438 | 2 | 3 | 0.000179657 |
Lactuca sativa | Lsat_1_v8_lg_3 | 1 | CH_lsa_449 | 2 | 2 | 0.000308404 |
Phaseolus vulgaris | Chr04 | 1 | CH_pvu_349 | 2 | 2 | 0.000220418 |
Vigna mungo | CM024077.1 | 1 | CH_vmu_280 | 2 | 2 | 0.000193842 |
Eutrema salsugineum | scaffold_10 | 2 | CH_esa_164 | 2 | 2 | 0.0000761499 |
Glycine max | Gm16 | 2 | CH_gma_556 | 2 | 2 | 0.000569336 |
Helianthus annuus | HanXRQChr15 | 2 | CH_han_682 | 2 | 2 | 0.000579643 |
Lonicera japonica | GWHAAZE00000007 | 2 | CH_lonja_438 | 2 | 3 | 0.000179657 |
Lactuca sativa | Lsat_1_v8_lg_3 | 2 | CH_lsa_449 | 2 | 2 | 0.000308404 |
Phaseolus vulgaris | Chr04 | 2 | CH_pvu_349 | 2 | 2 | 0.000220418 |
Vigna mungo | CM024077.1 | 2 | CH_vmu_280 | 2 | 2 | 0.000193842 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |