Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS21

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Corylus avellana 1 1 CH_cav_243 2 2 0.0000766695
Erigeron canadensis Conyza_canadensis_scaffold:7 1 CH_eca_139 3 5 0.000000120804
Nelumbo nucifera chr4 1 CH_nnu_361 2 4 0.000261609
Rosa chinensis RcHm_v2.0_Chr4 1 CH_rch_646 2 4 0.000239182
Simmondsia chinensis GWHAASQ00000011 1 CH_sci_281 2 3 0.000766229
Solanum lycopersicum SL4.0ch04 1 CH_sly_406 2 2 0.000176082
Solanum pennellii Spenn-ch04 1 CH_spe_427 2 2 0.000266874
Solanum tuberosum ST4.03ch04 1 CH_stu_456 2 2 0.000153736
Theobroma cacao Chromosome_7 1 CH_tca_415 2 3 0.000659107
Corylus avellana 1 2 CH_cav_243 2 2 0.0000766695
Erigeron canadensis Conyza_canadensis_scaffold:7 2 CH_eca_139 3 5 0.000000120804
Nelumbo nucifera chr4 2 CH_nnu_361 2 4 0.000261609
Rosa chinensis RcHm_v2.0_Chr4 2 CH_rch_646 2 4 0.000239182
Simmondsia chinensis GWHAASQ00000011 2 CH_sci_281 2 3 0.000766229
Solanum lycopersicum SL4.0ch04 2 CH_sly_406 2 2 0.000176082
Solanum pennellii Spenn-ch04 2 CH_spe_427 2 2 0.000266874
Solanum tuberosum ST4.03ch04 2 CH_stu_456 2 2 0.000153736
Theobroma cacao Chromosome_7 2 CH_tca_415 2 3 0.000659107

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001