Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group5 1 CH_ach_285 2 4 0.000977694
Arabidopsis thaliana Chr1 1 CH_ath_362 3 45 0.000348727
Brassica carinata ChrB04 1 CH_bca_791 2 2 0.000213764
Carica papaya supercontig_84 1 CH_cpa_297 2 2 0.000285198
Manihot esculenta Chromosome06 1 CH_mes_353 2 2 0.000183189
Prunus persica Pp02 1 CH_ppe_326 2 2 0.0000745962
Theobroma cacao Chromosome_9 1 CH_tca_158 3 6 0.000000160905
Actinidia chinensis Lachesis_group5 2 CH_ach_285 2 4 0.000977694
Arabidopsis thaliana Chr1 2 CH_ath_362 3 45 0.000348727
Brassica carinata ChrB04 2 CH_bca_791 2 2 0.000213764
Carica papaya supercontig_84 2 CH_cpa_297 2 2 0.000285198
Eucalyptus grandis Chr01 2 CH_egr_668 2 2 0.0000585274
Manihot esculenta Chromosome06 2 CH_mes_353 2 2 0.000183189
Prunus persica Pp02 2 CH_ppe_326 2 2 0.0000745962
Theobroma cacao Chromosome_9 2 CH_tca_158 3 6 0.000000160905

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001