Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS15a

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Davidia involucrata GWHABJS00000009 1 CH_din_108 3 3 0.0000000375197
Petunia axillaris Peaxi162Scf00066 1 CH_pax_246 2 2 0.000211067
Populus trichocarpa Chr09 1 CH_ptr_534 2 2 0.000867002
Salvia bowleyana GWHASIU00000006 1 CH_sbo_173 4 36 0.000000581128
Solanum lycopersicum SL4.0ch04 1 CH_sly_469 2 2 0.000352164
Solanum pennellii Spenn-ch04 1 CH_spe_217 3 17 0.00000806759
Theobroma cacao Chromosome_10 1 CH_tca_432 2 2 0.000732386
Tripterygium wilfordii NC_052238.1 1 CH_twi_243 2 2 0.000334504
Davidia involucrata GWHABJS00000009 2 CH_din_108 3 3 0.0000000375197
Petunia axillaris Peaxi162Scf00066 2 CH_pax_246 2 2 0.000211067
Populus trichocarpa Chr09 2 CH_ptr_534 2 2 0.000867002
Salvia bowleyana GWHASIU00000006 2 CH_sbo_173 4 36 0.000000581128
Solanum lycopersicum SL4.0ch04 2 CH_sly_469 2 2 0.000352164
Solanum pennellii Spenn-ch04 2 CH_spe_217 3 17 0.00000806759
Theobroma cacao Chromosome_10 2 CH_tca_432 2 2 0.000732386
Tripterygium wilfordii NC_052238.1 2 CH_twi_243 2 2 0.000334504

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001