Functional clusters
Information
- Type MapMan
- Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS11
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Ceratophyllum demersum | 1 | 1 | CH_cde_262 | 2 | 3 | 0.000710769 |
Glycine max | Gm09 | 1 | CH_gma_502 | 2 | 2 | 0.000379557 |
Magnolia biondii | Chr16 | 1 | CH_mbi_447 | 2 | 2 | 0.000145698 |
Malus domestica | Chr02 | 1 | CH_mdo_47 | 6 | 17 | 0.000000000000010079 |
Oryza sativa ssp. japonica | chr07 | 1 | CH_osa_384 | 2 | 2 | 0.000792184 |
Oryza sativa ssp. japonica | chr04 | 1 | CH_osa_385 | 2 | 2 | 0.000792184 |
Punica granatum | NC_045134.1 | 1 | CH_pgr_276 | 2 | 2 | 0.000225107 |
Phaseolus vulgaris | Chr03 | 1 | CH_pvu_401 | 2 | 2 | 0.000440836 |
Solanum lycopersicum | SL4.0ch06 | 1 | CH_sly_405 | 2 | 2 | 0.000176082 |
Solanum pennellii | Spenn-ch06 | 1 | CH_spe_355 | 2 | 2 | 0.000133437 |
Solanum tuberosum | ST4.03ch06 | 1 | CH_stu_163 | 3 | 4 | 0.0000000630246 |
Ceratophyllum demersum | 1 | 2 | CH_cde_262 | 2 | 3 | 0.000710769 |
Glycine max | Gm09 | 2 | CH_gma_502 | 2 | 2 | 0.000379557 |
Magnolia biondii | Chr16 | 2 | CH_mbi_447 | 2 | 2 | 0.000145698 |
Malus domestica | Chr02 | 2 | CH_mdo_47 | 6 | 17 | 0.000000000000010079 |
Oryza sativa ssp. japonica | chr07 | 2 | CH_osa_384 | 2 | 2 | 0.000792184 |
Oryza sativa ssp. japonica | chr04 | 2 | CH_osa_385 | 2 | 2 | 0.000792184 |
Punica granatum | NC_045134.1 | 2 | CH_pgr_276 | 2 | 2 | 0.000225107 |
Phaseolus vulgaris | Chr03 | 2 | CH_pvu_401 | 2 | 2 | 0.000440836 |
Solanum lycopersicum | SL4.0ch06 | 2 | CH_sly_405 | 2 | 2 | 0.000176082 |
Solanum pennellii | Spenn-ch06 | 2 | CH_spe_355 | 2 | 2 | 0.000133437 |
Solanum tuberosum | ST4.03ch06 | 2 | CH_stu_163 | 3 | 4 | 0.0000000630246 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |