Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS9

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-11 1 CH_aar_199 2 2 0.000273698
Cannabis sativa NC_044377.1 1 CH_cansat_287 2 2 0.000196993
Cicer arietinum L. Ca_LG7_v3 1 CH_car_290 2 3 0.000700425
Citrus clementina scaffold_4 1 CH_ccl_387 2 2 0.000246093
Nicotiana tabacum Nitab4.5_0000703 1 CH_nta_136 2 2 0.000329182
Oryza sativa ssp. japonica chr11 1 CH_osa_399 2 4 0.000950562
Salvia bowleyana GWHASIU00000007 1 CH_sbo_242 3 18 0.0000253166
Salix brachista GWHAAZH00000006 1 CH_sbr_377 2 2 0.00063014
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_396 2 3 0.00083625
Aethionema arabicum LG-11 2 CH_aar_199 2 2 0.000273698
Cannabis sativa NC_044377.1 2 CH_cansat_287 2 2 0.000196993
Cicer arietinum L. Ca_LG7_v3 2 CH_car_290 2 3 0.000700425
Citrus clementina scaffold_4 2 CH_ccl_387 2 2 0.000246093
Nicotiana tabacum Nitab4.5_0000703 2 CH_nta_136 2 2 0.000329182
Oryza sativa ssp. japonica chr11 2 CH_osa_399 2 4 0.000950562
Salvia bowleyana GWHASIU00000007 2 CH_sbo_242 3 18 0.0000253166
Salix brachista GWHAAZH00000006 2 CH_sbr_377 2 2 0.00063014
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_396 2 3 0.00083625

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001