Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPSa

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.02 1 CH_arhy_1 27 78 2.56849e-66
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 1 CH_arhy_603 3 6 0.000308272
Carya illinoinensis Chr01 1 CH_cil_424 2 2 0.000185948
Manihot esculenta Chromosome11 1 CH_mes_190 3 4 0.000000447414
Manihot esculenta Chromosome04 1 CH_mes_488 2 2 0.000915947
Physcomitrium patens Chr14 1 CH_ppa_29 3 3 0.000000112634
Rhododendron simsii chr02 1 CH_rsi_336 2 2 0.0000645307
Salvia bowleyana GWHASIU00000007 1 CH_sbo_333 2 2 0.000136494
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.02 2 CH_arhy_1 27 78 2.56849e-66
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 2 CH_arhy_603 3 6 0.000308272
Carya illinoinensis Chr01 2 CH_cil_424 2 2 0.000185948
Manihot esculenta Chromosome11 2 CH_mes_190 3 4 0.000000447414
Manihot esculenta Chromosome04 2 CH_mes_488 2 2 0.000915947
Physcomitrium patens Chr14 2 CH_ppa_29 3 3 0.000000112634
Rhododendron simsii chr02 2 CH_rsi_336 2 2 0.0000645307
Salvia bowleyana GWHASIU00000007 2 CH_sbo_333 2 2 0.000136494

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001