Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear export.export factor (NMD3)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Erigeron canadensis Conyza_canadensis_scaffold:1 1 CH_eca_337 2 2 0.000134617
Pisum sativum chr2LG1 1 CH_psa_23 5 9 0.0000000000000419792
Papaver somniferum NC_039364.1 1 CH_pso_469 2 2 0.00013514
Rosa chinensis RcHm_v2.0_Chr3 1 CH_rch_698 2 3 0.000358775
Sechium edule LG14 1 CH_sed_109 3 5 0.000000763342
Tarenaya hassleriana NW_010961290.1 1 CH_tha_24 4 8 0.000000000357742
Erigeron canadensis Conyza_canadensis_scaffold:1 2 CH_eca_337 2 2 0.000134617
Pisum sativum chr2LG1 2 CH_psa_23 5 9 0.0000000000000419792
Papaver somniferum NC_039364.1 2 CH_pso_469 2 2 0.00013514
Rosa chinensis RcHm_v2.0_Chr3 2 CH_rch_698 2 3 0.000358775
Sechium edule LG14 2 CH_sed_109 3 5 0.000000763342
Tarenaya hassleriana NW_010961290.1 2 CH_tha_24 4 8 0.000000000357742

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001