Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL10

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 1 CH_amhyb_228 2 2 0.000505051
Beta vulgaris Chr7_EL10_PGA_scaffold5 1 CH_bvu_172 2 2 0.0000827917
Corylus avellana 2 1 CH_cav_158 3 8 0.00000197449
Lonicera japonica GWHAAZE00000001 1 CH_lonja_458 2 2 0.000179662
Populus trichocarpa Chr13 1 CH_ptr_475 2 3 0.000520176
Solanum lycopersicum SL4.0ch06 1 CH_sly_505 2 3 0.000528221
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 2 CH_amhyb_228 2 2 0.000505051
Beta vulgaris Chr7_EL10_PGA_scaffold5 2 CH_bvu_172 2 2 0.0000827917
Corylus avellana 2 2 CH_cav_158 3 8 0.00000197449
Lonicera japonica GWHAAZE00000001 2 CH_lonja_458 2 2 0.000179662
Populus trichocarpa Chr13 2 CH_ptr_475 2 3 0.000520176
Solanum lycopersicum SL4.0ch06 2 CH_sly_505 2 3 0.000528221

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001