Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPP2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_4 1 CH_aly_136 3 4 0.000000522751
Arabidopsis thaliana Chr2 1 CH_ath_342 2 2 0.000286492
Cucumis sativus L. chr6 1 CH_csa_321 2 2 0.000834759
Daucus carota DCARv2_Chr3 1 CH_dca_419 2 2 0.000637775
Helianthus annuus HanXRQChr13 1 CH_han_680 2 2 0.000579643
Papaver somniferum NC_039364.1 1 CH_pso_683 3 37 0.000707819
Papaver somniferum NC_039367.1 1 CH_pso_711 3 39 0.000899843
Theobroma cacao Chromosome_9 1 CH_tca_391 2 2 0.000439432
Arabidopsis lyrata scaffold_4 2 CH_aly_136 3 4 0.000000522751
Arabidopsis thaliana Chr2 2 CH_ath_342 2 2 0.000286492
Cucumis sativus L. chr6 2 CH_csa_321 2 2 0.000834759
Daucus carota DCARv2_Chr3 2 CH_dca_419 2 2 0.000637775
Helianthus annuus HanXRQChr13 2 CH_han_680 2 2 0.000579643
Papaver somniferum NC_039364.1 2 CH_pso_683 3 37 0.000707819
Papaver somniferum NC_039367.1 2 CH_pso_711 3 39 0.000899843
Theobroma cacao Chromosome_9 2 CH_tca_391 2 2 0.000439432

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001