Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPP1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC07 1 CH_bca_99 4 7 0.0000000003384
Camellia sinensis var. sinensis Chr7 1 CH_camsi_721 2 2 0.000275128
Cicer arietinum L. Ca_LG3_v3 1 CH_car_307 2 2 0.000778301
Erythranthe guttata scaffold_6 1 CH_egut_421 2 2 0.000436888
Erythranthe guttata scaffold_10 1 CH_egut_422 2 2 0.000436888
Fragaria vesca Fvb3 1 CH_fve_162 3 4 0.000000416421
Malus domestica Chr05 1 CH_mdo_704 3 33 0.000657282
Papaver somniferum NW_020625487.1 1 CH_pso_10 10 26 1.09116e-27
Sequoiadendron giganteum chr9 1 CH_sgi_1272 2 3 0.000438418
Solanum tuberosum ST4.03ch07 1 CH_stu_602 2 2 0.000768679
Theobroma cacao Chromosome_3 1 CH_tca_341 2 2 0.000219716
Brassica carinata ChrC07 2 CH_bca_99 4 7 0.0000000003384
Camellia sinensis var. sinensis Chr7 2 CH_camsi_721 2 2 0.000275128
Cicer arietinum L. Ca_LG3_v3 2 CH_car_307 2 2 0.000778301
Erythranthe guttata scaffold_6 2 CH_egut_421 2 2 0.000436888
Erythranthe guttata scaffold_10 2 CH_egut_422 2 2 0.000436888
Fragaria vesca Fvb3 2 CH_fve_162 3 4 0.000000416421
Malus domestica Chr05 2 CH_mdo_704 3 33 0.000657282
Papaver somniferum NW_020625487.1 2 CH_pso_10 10 26 1.09116e-27
Sequoiadendron giganteum chr9 2 CH_sgi_1272 2 3 0.000438418
Solanum tuberosum ST4.03ch07 2 CH_stu_602 2 2 0.000768679
Theobroma cacao Chromosome_3 2 CH_tca_341 2 2 0.000219716

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001