Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL39

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Glycine max Gm06 1 CH_gma_501 2 2 0.000379557
Oryza sativa ssp. japonica chr02 1 CH_osa_343 2 3 0.000475289
Populus trichocarpa Chr06 1 CH_ptr_490 2 2 0.000578001
Tripterygium wilfordii NC_052254.1 1 CH_twi_307 2 2 0.00083626
Vitis vinifera chr11 1 CH_vvi_408 2 3 0.000684523
Glycine max Gm06 2 CH_gma_501 2 2 0.000379557
Oryza sativa ssp. japonica chr02 2 CH_osa_343 2 3 0.000475289
Populus trichocarpa Chr06 2 CH_ptr_490 2 2 0.000578001
Tripterygium wilfordii NC_052254.1 2 CH_twi_307 2 2 0.00083626
Vitis vinifera chr11 2 CH_vvi_408 2 3 0.000684523

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001