Functional clusters
Information
- Type MapMan
- Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL39
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Glycine max | Gm06 | 1 | CH_gma_501 | 2 | 2 | 0.000379557 |
Oryza sativa ssp. japonica | chr02 | 1 | CH_osa_343 | 2 | 3 | 0.000475289 |
Populus trichocarpa | Chr06 | 1 | CH_ptr_490 | 2 | 2 | 0.000578001 |
Tripterygium wilfordii | NC_052254.1 | 1 | CH_twi_307 | 2 | 2 | 0.00083626 |
Vitis vinifera | chr11 | 1 | CH_vvi_408 | 2 | 3 | 0.000684523 |
Glycine max | Gm06 | 2 | CH_gma_501 | 2 | 2 | 0.000379557 |
Oryza sativa ssp. japonica | chr02 | 2 | CH_osa_343 | 2 | 3 | 0.000475289 |
Populus trichocarpa | Chr06 | 2 | CH_ptr_490 | 2 | 2 | 0.000578001 |
Tripterygium wilfordii | NC_052254.1 | 2 | CH_twi_307 | 2 | 2 | 0.00083626 |
Vitis vinifera | chr11 | 2 | CH_vvi_408 | 2 | 3 | 0.000684523 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |