Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL36a

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_3703_HRSCAF_3719 1 CH_ama_136 2 3 0.00077594
Amborella trichopoda AmTr_v1.0_scaffold00040 1 CH_atr_315 2 3 0.000714919
Oryza sativa ssp. japonica chr07 1 CH_osa_269 2 2 0.000158437
Punica granatum NC_045127.1 1 CH_pgr_259 2 3 0.000225098
Sequoiadendron giganteum chr7 1 CH_sgi_1022 2 3 0.000146142
Vitis vinifera chr1 1 CH_vvi_407 2 3 0.000684523
Avicennia marina ScioBoG_3703_HRSCAF_3719 2 CH_ama_136 2 3 0.00077594
Amborella trichopoda AmTr_v1.0_scaffold00040 2 CH_atr_315 2 3 0.000714919
Oryza sativa ssp. japonica chr07 2 CH_osa_269 2 2 0.000158437
Punica granatum NC_045127.1 2 CH_pgr_259 2 3 0.000225098
Sequoiadendron giganteum chr7 2 CH_sgi_1022 2 3 0.000146142
Vitis vinifera chr1 2 CH_vvi_407 2 3 0.000684523

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001