Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL36

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-1 1 CH_aar_198 2 2 0.000273698
Brassica carinata ChrC02 1 CH_bca_397 3 4 0.00000265638
Carya illinoinensis Chr05 1 CH_cil_348 2 2 0.0000619828
Carica papaya supercontig_6 1 CH_cpa_193 2 2 0.0000950661
Glycine max Gm20 1 CH_gma_427 2 2 0.000227734
Lactuca sativa Lsat_1_v8_lg_3 1 CH_lsa_448 2 2 0.000308404
Salvia bowleyana GWHASIU00000003 1 CH_sbo_476 3 76 0.000870638
Tarenaya hassleriana NW_010966881.1 1 CH_tha_205 2 2 0.00069847
Aethionema arabicum LG-1 2 CH_aar_198 2 2 0.000273698
Brassica carinata ChrC02 2 CH_bca_397 3 4 0.00000265638
Carya illinoinensis Chr05 2 CH_cil_348 2 2 0.0000619828
Carica papaya supercontig_6 2 CH_cpa_193 2 2 0.0000950661
Glycine max Gm20 2 CH_gma_427 2 2 0.000227734
Lactuca sativa Lsat_1_v8_lg_3 2 CH_lsa_448 2 2 0.000308404
Salvia bowleyana GWHASIU00000003 2 CH_sbo_476 3 76 0.000870638
Tarenaya hassleriana NW_010966881.1 2 CH_tha_205 2 2 0.00069847

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001