Functional clusters
Information
- Type MapMan
- Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL35a
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Coffea canephora | chr2 | 1 | CH_ccan_245 | 2 | 12 | 0.000127766 |
Carya illinoinensis | Chr01 | 1 | CH_cil_422 | 2 | 2 | 0.000185948 |
Fragaria vesca | Fvb3 | 1 | CH_fve_389 | 2 | 2 | 0.000353461 |
Hydrangea macrophylla | Hma1.2p1_0026F.1 | 1 | CH_hma_13 | 4 | 4 | 0.0000000000205658 |
Solanum lycopersicum | SL4.0ch05 | 1 | CH_sly_404 | 2 | 2 | 0.000176082 |
Solanum pennellii | Spenn-ch05 | 1 | CH_spe_354 | 2 | 2 | 0.000133437 |
Coffea canephora | chr2 | 2 | CH_ccan_245 | 2 | 12 | 0.000127766 |
Carya illinoinensis | Chr01 | 2 | CH_cil_422 | 2 | 2 | 0.000185948 |
Fragaria vesca | Fvb3 | 2 | CH_fve_389 | 2 | 2 | 0.000353461 |
Hydrangea macrophylla | Hma1.2p1_0026F.1 | 2 | CH_hma_13 | 4 | 4 | 0.0000000000205658 |
Solanum lycopersicum | SL4.0ch05 | 2 | CH_sly_404 | 2 | 2 | 0.000176082 |
Solanum pennellii | Spenn-ch05 | 2 | CH_spe_354 | 2 | 2 | 0.000133437 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |