Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL35a

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr2 1 CH_ccan_245 2 12 0.000127766
Carya illinoinensis Chr01 1 CH_cil_422 2 2 0.000185948
Fragaria vesca Fvb3 1 CH_fve_389 2 2 0.000353461
Hydrangea macrophylla Hma1.2p1_0026F.1 1 CH_hma_13 4 4 0.0000000000205658
Solanum lycopersicum SL4.0ch05 1 CH_sly_404 2 2 0.000176082
Solanum pennellii Spenn-ch05 1 CH_spe_354 2 2 0.000133437
Coffea canephora chr2 2 CH_ccan_245 2 12 0.000127766
Carya illinoinensis Chr01 2 CH_cil_422 2 2 0.000185948
Fragaria vesca Fvb3 2 CH_fve_389 2 2 0.000353461
Hydrangea macrophylla Hma1.2p1_0026F.1 2 CH_hma_13 4 4 0.0000000000205658
Solanum lycopersicum SL4.0ch05 2 CH_sly_404 2 2 0.000176082
Solanum pennellii Spenn-ch05 2 CH_spe_354 2 2 0.000133437

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001