Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL35

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Carica papaya supercontig_1 1 CH_cpa_267 2 3 0.000285185
Chenopodium quinoa C_Quinoa_Scaffold_1759 1 CH_cqu_240 3 7 0.00000235665
Populus trichocarpa Chr06 1 CH_ptr_429 2 2 0.000346801
Simmondsia chinensis GWHAASQ00000020 1 CH_sci_153 2 2 0.0000851426
Selenicereus undatus Scaffold_33673 1 CH_sun_234 2 2 0.000435983
Carica papaya supercontig_1 2 CH_cpa_267 2 3 0.000285185
Chenopodium quinoa C_Quinoa_Scaffold_1759 2 CH_cqu_240 3 7 0.00000235665
Populus trichocarpa Chr06 2 CH_ptr_429 2 2 0.000346801
Simmondsia chinensis GWHAASQ00000020 2 CH_sci_153 2 2 0.0000851426
Selenicereus undatus Scaffold_33673 2 CH_sun_234 2 2 0.000435983

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001