Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL32

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr10 1 CH_acertr_200 3 9 0.00000625889
Beta vulgaris Chr2_EL10_PGA_scaffold6 1 CH_bvu_277 2 3 0.000745074
Carya illinoinensis Chr10 1 CH_cil_473 2 2 0.000371897
Chenopodium quinoa C_Quinoa_Scaffold_1426 1 CH_cqu_235 3 4 0.0000022223
Chenopodium quinoa C_Quinoa_Scaffold_4329 1 CH_cqu_273 3 6 0.0000111078
Chenopodium quinoa C_Quinoa_Scaffold_1280 1 CH_cqu_87 4 5 0.000000000526517
Gossypium hirsutum A07 1 CH_ghi_287 3 3 0.000000389289
Gossypium hirsutum D07 1 CH_ghi_332 3 4 0.00000155696
Glycine max Gm08 1 CH_gma_595 2 2 0.00079707
Gossypium raimondii Chr01 1 CH_gra_134 3 3 0.000000150895
Oryza sativa ssp. japonica chr09 1 CH_osa_120 3 9 0.000000234263
Acer truncatum chr10 2 CH_acertr_200 3 9 0.00000625889
Beta vulgaris Chr2_EL10_PGA_scaffold6 2 CH_bvu_277 2 3 0.000745074
Carya illinoinensis Chr10 2 CH_cil_473 2 2 0.000371897
Chenopodium quinoa C_Quinoa_Scaffold_1426 2 CH_cqu_235 3 4 0.0000022223
Chenopodium quinoa C_Quinoa_Scaffold_4329 2 CH_cqu_273 3 6 0.0000111078
Chenopodium quinoa C_Quinoa_Scaffold_1280 2 CH_cqu_87 4 5 0.000000000526517
Gossypium hirsutum A07 2 CH_ghi_287 3 3 0.000000389289
Gossypium hirsutum D07 2 CH_ghi_332 3 4 0.00000155696
Glycine max Gm08 2 CH_gma_595 2 2 0.00079707
Gossypium raimondii Chr01 2 CH_gra_134 3 3 0.000000150895
Oryza sativa ssp. japonica chr09 2 CH_osa_120 3 9 0.000000234263

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001