Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL29

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr3 1 CH_ath_257 2 3 0.0000859463
Cicer arietinum L. Ca_LG5_v3 1 CH_car_289 2 3 0.000700425
Cardamine hirsuta Chr3 1 CH_chi_222 2 2 0.0000691204
Carya illinoinensis Chr01 1 CH_cil_472 2 2 0.000371897
Cucumis melo chr11 1 CH_cme_174 2 2 0.0000667111
Capsella rubella scaffold_3 1 CH_cru_257 2 2 0.0000731154
Medicago truncatula chr4 1 CH_mtr_512 2 2 0.0000410863
Olea europaea chr22 1 CH_oeu_393 2 6 0.000800598
Salvia bowleyana GWHASIU00000003 1 CH_sbo_320 2 3 0.000136491
Schrenkiella parvula ch3-1 1 CH_spa_164 2 2 0.000078734
Arabidopsis thaliana Chr3 2 CH_ath_257 2 3 0.0000859463
Cicer arietinum L. Ca_LG5_v3 2 CH_car_289 2 3 0.000700425
Cardamine hirsuta Chr3 2 CH_chi_222 2 2 0.0000691204
Carya illinoinensis Chr01 2 CH_cil_472 2 2 0.000371897
Cucumis melo chr11 2 CH_cme_174 2 2 0.0000667111
Capsella rubella scaffold_3 2 CH_cru_257 2 2 0.0000731154
Olea europaea chr22 2 CH_oeu_393 2 6 0.000800598
Salvia bowleyana GWHASIU00000003 2 CH_sbo_320 2 3 0.000136491
Schrenkiella parvula ch3-1 2 CH_spa_164 2 2 0.000078734

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001