Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL5

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC01 1 CH_bca_982 2 2 0.00059854
Brassica carinata ChrB06 1 CH_bca_983 2 2 0.00059854
Brassica rapa A03 1 CH_bra_262 2 2 0.000257588
Camellia sinensis var. sinensis Chr9 1 CH_camsi_927 2 3 0.000825341
Erythranthe guttata scaffold_4 1 CH_egut_289 2 2 0.0000728147
Glycine max Gm13 1 CH_gma_499 2 2 0.000379557
Glycine max Gm07 1 CH_gma_500 2 2 0.000379557
Lonicera japonica GWHAAZE00000104 1 CH_lonja_135 4 10 0.00000000202896
Malus domestica Chr15 1 CH_mdo_548 2 2 0.000227527
Manihot esculenta Chromosome05 1 CH_mes_351 2 2 0.000183189
Olea europaea chr4 1 CH_oeu_421 2 3 0.00096076
Oryza sativa ssp. japonica chr01 1 CH_osa_205 2 2 0.0000528123
Punica granatum NC_045130.1 1 CH_pgr_275 2 2 0.000225107
Papaver somniferum NC_039362.1 1 CH_pso_476 2 2 0.00013514
Papaver somniferum NC_039358.1 1 CH_pso_609 2 3 0.000405408
Brassica carinata ChrC01 2 CH_bca_982 2 2 0.00059854
Brassica carinata ChrB06 2 CH_bca_983 2 2 0.00059854
Brassica rapa A03 2 CH_bra_262 2 2 0.000257588
Camellia sinensis var. sinensis Chr9 2 CH_camsi_927 2 3 0.000825341
Erythranthe guttata scaffold_4 2 CH_egut_289 2 2 0.0000728147
Glycine max Gm13 2 CH_gma_499 2 2 0.000379557
Glycine max Gm07 2 CH_gma_500 2 2 0.000379557
Lonicera japonica GWHAAZE00000104 2 CH_lonja_135 4 10 0.00000000202896
Malus domestica Chr15 2 CH_mdo_548 2 2 0.000227527
Manihot esculenta Chromosome05 2 CH_mes_351 2 2 0.000183189
Olea europaea chr4 2 CH_oeu_421 2 3 0.00096076
Oryza sativa ssp. japonica chr01 2 CH_osa_205 2 2 0.0000528123
Punica granatum NC_045130.1 2 CH_pgr_275 2 2 0.000225107
Papaver somniferum NC_039362.1 2 CH_pso_476 2 2 0.00013514
Papaver somniferum NC_039358.1 2 CH_pso_609 2 3 0.000405408

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001