Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL27

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr8 1 CH_acertr_525 2 3 0.000634436
Beta vulgaris Chr6_EL10_PGA_scaffold0 1 CH_bvu_224 2 2 0.000248375
Carica papaya supercontig_7 1 CH_cpa_294 2 2 0.000285198
Cucumis sativus L. chr4 1 CH_csa_297 2 2 0.000500856
Eutrema salsugineum scaffold_1 1 CH_esa_303 2 3 0.000685305
Pisum sativum chr3LG5 1 CH_psa_325 2 2 0.000312981
Sechium edule LG13 1 CH_sed_250 2 2 0.000214026
Sequoiadendron giganteum chr1 1 CH_sgi_1021 2 3 0.000146142
Acer truncatum chr8 2 CH_acertr_525 2 3 0.000634436
Beta vulgaris Chr6_EL10_PGA_scaffold0 2 CH_bvu_224 2 2 0.000248375
Carica papaya supercontig_7 2 CH_cpa_294 2 2 0.000285198
Cucumis sativus L. chr4 2 CH_csa_297 2 2 0.000500856
Eutrema salsugineum scaffold_1 2 CH_esa_303 2 3 0.000685305
Pisum sativum chr3LG5 2 CH_psa_325 2 2 0.000312981
Sechium edule LG13 2 CH_sed_250 2 2 0.000214026
Sequoiadendron giganteum chr1 2 CH_sgi_1021 2 3 0.000146142

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001