Functional clusters
Information
- Type MapMan
- Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL27
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr8 | 1 | CH_acertr_525 | 2 | 3 | 0.000634436 |
Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 1 | CH_bvu_224 | 2 | 2 | 0.000248375 |
Carica papaya | supercontig_7 | 1 | CH_cpa_294 | 2 | 2 | 0.000285198 |
Cucumis sativus L. | chr4 | 1 | CH_csa_297 | 2 | 2 | 0.000500856 |
Eutrema salsugineum | scaffold_1 | 1 | CH_esa_303 | 2 | 3 | 0.000685305 |
Pisum sativum | chr3LG5 | 1 | CH_psa_325 | 2 | 2 | 0.000312981 |
Sechium edule | LG13 | 1 | CH_sed_250 | 2 | 2 | 0.000214026 |
Sequoiadendron giganteum | chr1 | 1 | CH_sgi_1021 | 2 | 3 | 0.000146142 |
Acer truncatum | chr8 | 2 | CH_acertr_525 | 2 | 3 | 0.000634436 |
Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 2 | CH_bvu_224 | 2 | 2 | 0.000248375 |
Carica papaya | supercontig_7 | 2 | CH_cpa_294 | 2 | 2 | 0.000285198 |
Cucumis sativus L. | chr4 | 2 | CH_csa_297 | 2 | 2 | 0.000500856 |
Eutrema salsugineum | scaffold_1 | 2 | CH_esa_303 | 2 | 3 | 0.000685305 |
Pisum sativum | chr3LG5 | 2 | CH_psa_325 | 2 | 2 | 0.000312981 |
Sechium edule | LG13 | 2 | CH_sed_250 | 2 | 2 | 0.000214026 |
Sequoiadendron giganteum | chr1 | 2 | CH_sgi_1021 | 2 | 3 | 0.000146142 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |