Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL22

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ceratophyllum demersum 3 1 CH_cde_95 2 2 0.0000789796
Carpinus fangiana Cfa06 1 CH_cfa_293 2 2 0.000227204
Chenopodium quinoa C_Quinoa_Scaffold_1168 1 CH_cqu_157 3 4 0.000000134699
Daucus carota DCARv2_Chr1 1 CH_dca_294 2 2 0.000191333
Helianthus annuus HanXRQChr06 1 CH_han_265 3 5 0.000000447934
Solanum lycopersicum SL4.0ch09 1 CH_sly_403 2 2 0.000176082
Solanum pennellii Spenn-ch09 1 CH_spe_425 2 2 0.000266874
Solanum tuberosum ST4.03ch09 1 CH_stu_455 2 2 0.000153736
Ceratophyllum demersum 3 2 CH_cde_95 2 2 0.0000789796
Carpinus fangiana Cfa06 2 CH_cfa_293 2 2 0.000227204
Chenopodium quinoa C_Quinoa_Scaffold_1168 2 CH_cqu_157 3 4 0.000000134699
Daucus carota DCARv2_Chr1 2 CH_dca_294 2 2 0.000191333
Helianthus annuus HanXRQChr06 2 CH_han_265 3 5 0.000000447934
Solanum lycopersicum SL4.0ch09 2 CH_sly_403 2 2 0.000176082
Solanum pennellii Spenn-ch09 2 CH_spe_425 2 2 0.000266874
Solanum tuberosum ST4.03ch09 2 CH_stu_455 2 2 0.000153736

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001