Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL21

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr9 1 CH_acertr_489 2 2 0.000422982
Brassica napus C08 1 CH_bna_428 3 10 0.0000281685
Brassica oleracea C8 1 CH_bol_205 3 11 0.0000147989
Camellia sinensis var. sinensis Chr3 1 CH_camsi_164 4 18 0.000000000884882
Carpinus fangiana Cfa03 1 CH_cfa_365 2 3 0.000681569
Carica papaya supercontig_113 1 CH_cpa_191 2 2 0.0000950661
Gossypium raimondii Chr06 1 CH_gra_347 2 2 0.000321664
Phaseolus vulgaris Chr01 1 CH_pvu_268 2 2 0.0000734727
Theobroma cacao Chromosome_5 1 CH_tca_414 2 3 0.000659107
Acer truncatum chr9 2 CH_acertr_489 2 2 0.000422982
Brassica oleracea C8 2 CH_bol_205 3 11 0.0000147989
Camellia sinensis var. sinensis Chr3 2 CH_camsi_164 4 18 0.000000000884882
Carpinus fangiana Cfa03 2 CH_cfa_365 2 3 0.000681569
Carica papaya supercontig_113 2 CH_cpa_191 2 2 0.0000950661
Gossypium hirsutum A09 2 CH_ghi_774 2 2 0.000560733
Gossypium raimondii Chr06 2 CH_gra_347 2 2 0.000321664
Phaseolus vulgaris Chr01 2 CH_pvu_268 2 2 0.0000734727
Theobroma cacao Chromosome_5 2 CH_tca_414 2 3 0.000659107

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001