Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL10a

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Gossypium raimondii Chr09 1 CH_gra_455 2 3 0.000964932
Punica granatum NC_045134.1 1 CH_pgr_274 2 2 0.000225107
Pisum sativum chr5LG3 1 CH_psa_276 2 2 0.00015649
Populus trichocarpa Chr04 1 CH_ptr_427 2 2 0.000346801
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_659 2 2 0.000239192
Striga asiatica scaffold147 1 CH_sas_128 2 3 0.000562805
Sechium edule LG11 1 CH_sed_291 2 2 0.000428052
Gossypium raimondii Chr09 2 CH_gra_455 2 3 0.000964932
Lotus japonicus chr2 2 CH_lja_366 2 2 0.000429046
Punica granatum NC_045134.1 2 CH_pgr_274 2 2 0.000225107
Pisum sativum chr5LG3 2 CH_psa_276 2 2 0.00015649
Populus trichocarpa Chr04 2 CH_ptr_427 2 2 0.000346801
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_659 2 2 0.000239192
Striga asiatica scaffold147 2 CH_sas_128 2 3 0.000562805
Sechium edule LG11 2 CH_sed_291 2 2 0.000428052

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001