Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.ITS1 rRNA removal.pre-rRNA processing endonuclease (NOB1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC08 1 CH_bca_1131 2 3 0.000961902
Brassica oleracea C6 1 CH_bol_302 2 2 0.000196117
Davidia involucrata GWHABJS00000017 1 CH_din_331 2 2 0.000150038
Rosa chinensis RcHm_v2.0_Chr7 1 CH_rch_378 3 10 0.00000285969
Brassica carinata ChrC08 2 CH_bca_1131 2 3 0.000961902
Brassica oleracea C6 2 CH_bol_302 2 2 0.000196117
Davidia involucrata GWHABJS00000017 2 CH_din_331 2 2 0.000150038
Rosa chinensis RcHm_v2.0_Chr7 2 CH_rch_378 3 10 0.00000285969

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001