Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.rRNA processing factor (APUM23)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group1 1 CH_ach_150 2 2 0.000162964
Capsicum annuum PGAv.1.6.scaffold635 1 CH_can_347 2 2 0.000247831
Carica papaya supercontig_25 1 CH_cpa_225 2 2 0.0000950661
Sequoiadendron giganteum chr4 1 CH_sgi_414 3 3 0.00000000355983
Vanilla planifolia CM028157.1 1 CH_vpl_56 3 7 0.000000286589
Actinidia chinensis Lachesis_group1 2 CH_ach_150 2 2 0.000162964
Capsicum annuum PGAv.1.6.scaffold635 2 CH_can_347 2 2 0.000247831
Carica papaya supercontig_25 2 CH_cpa_225 2 2 0.0000950661
Sequoiadendron giganteum chr4 2 CH_sgi_414 3 3 0.00000000355983
Vanilla planifolia CM028157.1 2 CH_vpl_56 3 7 0.000000286589

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001