Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.rRNA transcription.rDNA chromatin transcription factor (NCL)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC05 1 CH_bca_68 4 5 0.0000000000307683
Brassica oleracea C5 1 CH_bol_340 2 2 0.000326861
Brassica rapa A05 1 CH_bra_309 2 2 0.000429314
Daucus carota DCARv2_Chr1 1 CH_dca_401 2 3 0.000573967
Manihot esculenta Chromosome04 1 CH_mes_286 2 2 0.0000610631
Trochodendron aralioides group0 1 CH_tar_315 2 3 0.000180104
Brassica carinata ChrC05 2 CH_bca_68 4 5 0.0000000000307683
Brassica oleracea C5 2 CH_bol_340 2 2 0.000326861
Brassica rapa A05 2 CH_bra_309 2 2 0.000429314
Daucus carota DCARv2_Chr1 2 CH_dca_401 2 3 0.000573967
Manihot esculenta Chromosome04 2 CH_mes_286 2 2 0.0000610631
Trochodendron aralioides group0 2 CH_tar_315 2 3 0.000180104

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001