Functional clusters

Information

  • Type MapMan
  • Description RNA processing.mRNA silencing.miRNA pathway.HYL1-interacting scaffold factor (CARP9)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group27 1 CH_ach_149 2 2 0.000162964
Carica papaya supercontig_131 1 CH_cpa_333 2 4 0.000570342
Medicago truncatula chr8 1 CH_mtr_624 2 2 0.000123259
Sequoiadendron giganteum chr3 1 CH_sgi_903 2 2 0.0000487151
Sapria himalayana scaffold13_12996478 1 CH_shi_30 3 4 0.0000000196176
Actinidia chinensis Lachesis_group27 2 CH_ach_149 2 2 0.000162964
Carica papaya supercontig_131 2 CH_cpa_333 2 4 0.000570342
Sequoiadendron giganteum chr3 2 CH_sgi_903 2 2 0.0000487151
Sapria himalayana scaffold13_12996478 2 CH_shi_30 3 4 0.0000000196176

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001