Functional clusters

Information

  • Type MapMan
  • Description RNA processing.mRNA silencing.miRNA pathway.pri-miRNA recruitment factor (STV1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 1 CH_acertr_431 2 2 0.000211491
Cannabis sativa NC_044372.1 1 CH_cansat_149 3 11 0.00000106692
Lactuca sativa Lsat_1_v8_lg_9 1 CH_lsa_456 2 2 0.000308404
Physcomitrium patens Chr04 1 CH_ppa_334 2 2 0.000919089
Populus trichocarpa Chr12 1 CH_ptr_510 2 2 0.000578001
Quercus lobata 7 1 CH_qlo_1051 2 3 0.000929264
Acer truncatum chr6 2 CH_acertr_431 2 2 0.000211491
Cannabis sativa NC_044372.1 2 CH_cansat_149 3 11 0.00000106692
Lactuca sativa Lsat_1_v8_lg_9 2 CH_lsa_456 2 2 0.000308404
Physcomitrium patens Chr04 2 CH_ppa_334 2 2 0.000919089
Populus trichocarpa Chr12 2 CH_ptr_510 2 2 0.000578001
Quercus lobata 7 2 CH_qlo_1051 2 3 0.000929264

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001