Functional clusters

Information

  • Type MapMan
  • Description RNA processing.mRNA silencing.miRNA pathway.DCL1-HYL1 miRNA biogenesis complex.component SERRATE

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-5 1 CH_aar_145 2 2 0.0000912326
Arabidopsis lyrata scaffold_4 1 CH_aly_349 2 4 0.000396
Capsicum annuum PGAv.1.6.scaffold65 1 CH_can_263 2 2 0.0000826105
Ceratophyllum demersum 1 1 CH_cde_166 2 2 0.000236939
Capsella rubella scaffold_4 1 CH_cru_354 2 4 0.000438661
Daucus carota DCARv2_B18 1 CH_dca_293 2 2 0.000191333
Helianthus annuus HanXRQChr03 1 CH_han_566 2 2 0.000231857
Aethionema arabicum LG-5 2 CH_aar_145 2 2 0.0000912326
Arabidopsis lyrata scaffold_4 2 CH_aly_349 2 4 0.000396
Capsicum annuum PGAv.1.6.scaffold65 2 CH_can_263 2 2 0.0000826105
Ceratophyllum demersum 1 2 CH_cde_166 2 2 0.000236939
Capsella rubella scaffold_4 2 CH_cru_354 2 4 0.000438661
Daucus carota DCARv2_B18 2 CH_dca_293 2 2 0.000191333
Helianthus annuus HanXRQChr03 2 CH_han_566 2 2 0.000231857

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001