Functional clusters

Information

  • Type MapMan
  • Description RNA processing.ribonuclease activities.RNA-dependent RNase P complex.component POP1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group9 1 CH_ach_148 2 2 0.000162964
Avicennia marina ScioBoG_25048_HRSCAF_25167 1 CH_ama_58 2 2 0.0000862218
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 1 CH_arhy_588 2 2 0.000299383
Coffea canephora chr0 1 CH_ccan_180 2 4 0.0000255534
Ceratophyllum demersum 9 1 CH_cde_111 2 2 0.0000789796
Carya illinoinensis Chr05 1 CH_cil_137 4 7 0.000000000125009
Carica papaya supercontig_18 1 CH_cpa_282 2 3 0.000285185
Davidia involucrata GWHABJS00000007 1 CH_din_353 2 2 0.000150038
Helianthus annuus HanXRQChr06 1 CH_han_586 2 2 0.000231857
Lonicera japonica GWHAAZE00000002 1 CH_lonja_393 2 2 0.0000598874
Magnolia biondii Chr19 1 CH_mbi_643 2 2 0.000728491
Malus domestica Chr17 1 CH_mdo_49 6 45 0.000000000000014363
Manihot esculenta Chromosome05 1 CH_mes_86 5 17 0.0000000000135395
Oryza sativa ssp. japonica chr11 1 CH_osa_215 2 2 0.0000528123
Trochodendron aralioides group0 1 CH_tar_370 2 2 0.00018011
Vitis vinifera chr9 1 CH_vvi_233 3 16 0.0000194235
Actinidia chinensis Lachesis_group9 2 CH_ach_148 2 2 0.000162964
Avicennia marina ScioBoG_25048_HRSCAF_25167 2 CH_ama_58 2 2 0.0000862218
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 2 CH_arhy_588 2 2 0.000299383
Coffea canephora chr0 2 CH_ccan_180 2 4 0.0000255534
Ceratophyllum demersum 9 2 CH_cde_111 2 2 0.0000789796
Carya illinoinensis Chr05 2 CH_cil_137 4 7 0.000000000125009
Carica papaya supercontig_18 2 CH_cpa_282 2 3 0.000285185
Davidia involucrata GWHABJS00000007 2 CH_din_353 2 2 0.000150038
Helianthus annuus HanXRQChr06 2 CH_han_586 2 2 0.000231857
Lonicera japonica GWHAAZE00000002 2 CH_lonja_393 2 2 0.0000598874
Magnolia biondii Chr19 2 CH_mbi_643 2 2 0.000728491
Malus domestica Chr17 2 CH_mdo_49 6 45 0.000000000000014363
Manihot esculenta Chromosome05 2 CH_mes_86 5 17 0.0000000000135395
Oryza sativa ssp. japonica chr11 2 CH_osa_215 2 2 0.0000528123
Trochodendron aralioides group0 2 CH_tar_370 2 2 0.00018011
Vitis vinifera chr9 2 CH_vvi_233 3 16 0.0000194235

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001