Functional clusters

Information

  • Type MapMan
  • Description RNA processing.RNA modification.tRNA methylation.TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex.component TRM734

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr11 1 CH_camsi_615 2 3 0.000137561
Davidia involucrata GWHABJS00000007 1 CH_din_253 2 2 0.0000500125
Erythranthe guttata scaffold_4 1 CH_egut_288 2 2 0.0000728147
Hydrangea macrophylla Hma1.2p1_0484F.1 1 CH_hma_191 2 2 0.000111086
Olea europaea chr16 1 CH_oeu_162 2 2 0.0000533789
Sequoiadendron giganteum chr6 1 CH_sgi_219 4 4 0.000000000000346852
Sapria himalayana scaffold17_11767850 1 CH_shi_192 2 5 0.000343063
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_228 2 2 0.0000929238
Camellia sinensis var. sinensis Chr11 2 CH_camsi_615 2 3 0.000137561
Davidia involucrata GWHABJS00000007 2 CH_din_253 2 2 0.0000500125
Erythranthe guttata scaffold_4 2 CH_egut_288 2 2 0.0000728147
Hydrangea macrophylla Hma1.2p1_0484F.1 2 CH_hma_191 2 2 0.000111086
Olea europaea chr16 2 CH_oeu_162 2 2 0.0000533789
Sequoiadendron giganteum chr6 2 CH_sgi_219 4 4 0.000000000000346852
Sapria himalayana scaffold17_11767850 2 CH_shi_192 2 5 0.000343063
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_228 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001