Functional clusters
Information
- Type MapMan
- Description RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA decapping complex.hydrolase component DCP2
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brassica carinata | ChrC04 | 1 | CH_bca_239 | 3 | 3 | 0.000000113097 |
Brassica carinata | ChrB06 | 1 | CH_bca_33 | 5 | 10 | 0.000000000000182277 |
Brassica napus | A04 | 1 | CH_bna_10 | 6 | 10 | 3.11721e-17 |
Brassica napus | C04 | 1 | CH_bna_264 | 3 | 4 | 0.000000751584 |
Brassica oleracea | C4 | 1 | CH_bol_43 | 4 | 7 | 0.000000000128321 |
Brassica rapa | A04 | 1 | CH_bra_8 | 6 | 10 | 4.82388e-18 |
Fragaria x ananassa | Fvb2-4 | 1 | CH_fan_605 | 2 | 6 | 0.000832611 |
Brassica carinata | ChrC04 | 2 | CH_bca_239 | 3 | 3 | 0.000000113097 |
Brassica carinata | ChrB06 | 2 | CH_bca_33 | 5 | 10 | 0.000000000000182277 |
Brassica oleracea | C4 | 2 | CH_bol_43 | 4 | 7 | 0.000000000128321 |
Brassica rapa | A04 | 2 | CH_bra_8 | 6 | 10 | 4.82388e-18 |
Fragaria x ananassa | Fvb2-4 | 2 | CH_fan_605 | 2 | 6 | 0.000832611 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |