Functional clusters

Information

  • Type MapMan
  • Description RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA decapping complex.regulatory component DCP1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 1 CH_acertr_413 2 2 0.000211491
Actinidia chinensis Lachesis_group5 1 CH_ach_230 2 2 0.000543213
Brassica carinata ChrB07 1 CH_bca_850 2 2 0.000320646
Citrus clementina scaffold_8 1 CH_ccl_196 3 7 0.00000141276
Fragaria vesca Fvb7 1 CH_fve_388 2 2 0.000353461
Lonicera japonica GWHAAZE00000002 1 CH_lonja_533 2 2 0.000359324
Quercus lobata 1 1 CH_qlo_793 2 2 0.000154887
Striga asiatica scaffold22 1 CH_sas_127 2 3 0.000562805
Simmondsia chinensis GWHAASQ00000021 1 CH_sci_212 2 2 0.000255428
Sequoiadendron giganteum chr9 1 CH_sgi_814 2 2 0.0000487151
Acer truncatum chr3 2 CH_acertr_413 2 2 0.000211491
Actinidia chinensis Lachesis_group5 2 CH_ach_230 2 2 0.000543213
Brassica carinata ChrB07 2 CH_bca_850 2 2 0.000320646
Citrus clementina scaffold_8 2 CH_ccl_196 3 7 0.00000141276
Fragaria vesca Fvb7 2 CH_fve_388 2 2 0.000353461
Lonicera japonica GWHAAZE00000002 2 CH_lonja_533 2 2 0.000359324
Quercus lobata 1 2 CH_qlo_793 2 2 0.000154887
Striga asiatica scaffold22 2 CH_sas_127 2 3 0.000562805
Simmondsia chinensis GWHAASQ00000021 2 CH_sci_212 2 2 0.000255428
Sequoiadendron giganteum chr9 2 CH_sgi_814 2 2 0.0000487151

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001