Functional clusters

Information

  • Type MapMan
  • Description RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA deadenylation.CCR4-NOT complex.component NOT4

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ceratophyllum demersum 7 1 CH_cde_267 2 2 0.000789796
Cardamine hirsuta Chr8 1 CH_chi_407 2 2 0.000691204
Carya illinoinensis Chr13 1 CH_cil_341 2 2 0.0000619828
Chenopodium quinoa C_Quinoa_Scaffold_3429 1 CH_cqu_197 3 6 0.000000673416
Chenopodium quinoa C_Quinoa_Scaffold_4082 1 CH_cqu_483 2 2 0.000473821
Durio zibethinus NW_019168492.1 1 CH_dzi_324 2 2 0.000463489
Helianthus annuus HanXRQChr05 1 CH_han_259 3 3 0.000000369592
Lonicera japonica GWHAAZE00000001 1 CH_lonja_526 2 2 0.000359324
Trochodendron aralioides group7 1 CH_tar_499 2 2 0.000600366
Utricularia gibba unitig_747 1 CH_ugi_201 2 2 0.000220378
Ceratophyllum demersum 7 2 CH_cde_267 2 2 0.000789796
Cardamine hirsuta Chr8 2 CH_chi_407 2 2 0.000691204
Carya illinoinensis Chr13 2 CH_cil_341 2 2 0.0000619828
Chenopodium quinoa C_Quinoa_Scaffold_3429 2 CH_cqu_197 3 6 0.000000673416
Chenopodium quinoa C_Quinoa_Scaffold_4082 2 CH_cqu_483 2 2 0.000473821
Durio zibethinus NW_019168492.1 2 CH_dzi_324 2 2 0.000463489
Helianthus annuus HanXRQChr05 2 CH_han_259 3 3 0.000000369592
Lonicera japonica GWHAAZE00000001 2 CH_lonja_526 2 2 0.000359324
Trochodendron aralioides group7 2 CH_tar_499 2 2 0.000600366
Utricularia gibba unitig_747 2 CH_ugi_201 2 2 0.000220378

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001