Functional clusters

Information

  • Type MapMan
  • Description RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA deadenylation.CCR4-NOT complex.component NOT3/5

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-11 1 CH_aar_140 2 2 0.0000912326
Arabidopsis lyrata scaffold_6 1 CH_aly_218 2 2 0.0000660044
Ceratophyllum demersum 2 1 CH_cde_261 2 3 0.000710769
Cardamine hirsuta Chr7 1 CH_chi_287 2 2 0.000207361
Erythranthe guttata scaffold_11 1 CH_egut_412 2 2 0.000436888
Sequoiadendron giganteum chr3 1 CH_sgi_1010 2 3 0.000146142
Sapria himalayana scaffold36_5715340 1 CH_shi_53 3 16 0.00000274552
Vaccinium macrocarpon scaffold00267_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_308 2 2 0.000278772
Aethionema arabicum LG-11 2 CH_aar_140 2 2 0.0000912326
Arabidopsis lyrata scaffold_6 2 CH_aly_218 2 2 0.0000660044
Ceratophyllum demersum 2 2 CH_cde_261 2 3 0.000710769
Cardamine hirsuta Chr7 2 CH_chi_287 2 2 0.000207361
Erythranthe guttata scaffold_11 2 CH_egut_412 2 2 0.000436888
Sequoiadendron giganteum chr3 2 CH_sgi_1010 2 3 0.000146142
Sapria himalayana scaffold36_5715340 2 CH_shi_53 3 16 0.00000274552
Vaccinium macrocarpon scaffold00267_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_308 2 2 0.000278772

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001