Functional clusters

Information

  • Type MapMan
  • Description RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA deadenylation.CCR4-NOT complex.scaffold component NOT1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr1 1 CH_camsi_921 2 3 0.000825341
Corylus avellana 1 1 CH_cav_70 3 3 0.00000000881765
Glycine max Gm03 1 CH_gma_484 2 3 0.000341591
Hydrangea macrophylla Hma1.2p1_0341F.1 1 CH_hma_131 2 2 0.000111086
Lonicera japonica GWHAAZE00000007 1 CH_lonja_450 2 2 0.000179662
Malus domestica Chr07 1 CH_mdo_708 2 4 0.000682538
Olea europaea chr3 1 CH_oeu_290 2 2 0.000320273
Pisum sativum chr4LG4 1 CH_psa_206 2 2 0.0000521635
Theobroma cacao Chromosome_3 1 CH_tca_332 2 2 0.000219716
Camellia sinensis var. sinensis Chr1 2 CH_camsi_921 2 3 0.000825341
Corylus avellana 1 2 CH_cav_70 3 3 0.00000000881765
Glycine max Gm03 2 CH_gma_484 2 3 0.000341591
Hydrangea macrophylla Hma1.2p1_0341F.1 2 CH_hma_131 2 2 0.000111086
Lonicera japonica GWHAAZE00000007 2 CH_lonja_450 2 2 0.000179662
Malus domestica Chr07 2 CH_mdo_708 2 4 0.000682538
Olea europaea chr3 2 CH_oeu_290 2 2 0.000320273
Pisum sativum chr4LG4 2 CH_psa_206 2 2 0.0000521635
Theobroma cacao Chromosome_3 2 CH_tca_332 2 2 0.000219716

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001