Functional clusters
Information
- Type MapMan
- Description RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA deadenylation.CCR4-NOT complex.scaffold component NOT1
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Camellia sinensis var. sinensis | Chr1 | 1 | CH_camsi_921 | 2 | 3 | 0.000825341 |
Corylus avellana | 1 | 1 | CH_cav_70 | 3 | 3 | 0.00000000881765 |
Glycine max | Gm03 | 1 | CH_gma_484 | 2 | 3 | 0.000341591 |
Hydrangea macrophylla | Hma1.2p1_0341F.1 | 1 | CH_hma_131 | 2 | 2 | 0.000111086 |
Lonicera japonica | GWHAAZE00000007 | 1 | CH_lonja_450 | 2 | 2 | 0.000179662 |
Malus domestica | Chr07 | 1 | CH_mdo_708 | 2 | 4 | 0.000682538 |
Olea europaea | chr3 | 1 | CH_oeu_290 | 2 | 2 | 0.000320273 |
Pisum sativum | chr4LG4 | 1 | CH_psa_206 | 2 | 2 | 0.0000521635 |
Theobroma cacao | Chromosome_3 | 1 | CH_tca_332 | 2 | 2 | 0.000219716 |
Camellia sinensis var. sinensis | Chr1 | 2 | CH_camsi_921 | 2 | 3 | 0.000825341 |
Corylus avellana | 1 | 2 | CH_cav_70 | 3 | 3 | 0.00000000881765 |
Glycine max | Gm03 | 2 | CH_gma_484 | 2 | 3 | 0.000341591 |
Hydrangea macrophylla | Hma1.2p1_0341F.1 | 2 | CH_hma_131 | 2 | 2 | 0.000111086 |
Lonicera japonica | GWHAAZE00000007 | 2 | CH_lonja_450 | 2 | 2 | 0.000179662 |
Malus domestica | Chr07 | 2 | CH_mdo_708 | 2 | 4 | 0.000682538 |
Olea europaea | chr3 | 2 | CH_oeu_290 | 2 | 2 | 0.000320273 |
Pisum sativum | chr4LG4 | 2 | CH_psa_206 | 2 | 2 | 0.0000521635 |
Theobroma cacao | Chromosome_3 | 2 | CH_tca_332 | 2 | 2 | 0.000219716 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |