Functional clusters

Information

  • Type MapMan
  • Description RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage Factor I (CF-Im) complex.component CPFS6/CFIm68

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Citrus clementina scaffold_4 1 CH_ccl_291 2 2 0.0000820311
Citrullus lanatus CG_Chr09 1 CH_cla_115 2 2 0.0000887115
Cucumis sativus L. chr7 1 CH_csa_236 3 45 0.000148065
Fragaria x ananassa Fvb4-1 1 CH_fan_178 3 4 0.00000058749
Fragaria vesca Fvb4 1 CH_fve_338 2 2 0.00017673
Glycine max Gm18 1 CH_gma_577 2 3 0.000683172
Glycine max Gm08 1 CH_gma_578 2 3 0.000683172
Medicago truncatula chr3 1 CH_mtr_509 2 2 0.0000410863
Punica granatum NC_045133.1 1 CH_pgr_273 2 2 0.000225107
Pisum sativum chr5LG3 1 CH_psa_215 2 2 0.0000521635
Phaseolus vulgaris Chr06 1 CH_pvu_267 2 2 0.0000734727
Rosa chinensis RcHm_v2.0_Chr4 1 CH_rch_578 2 2 0.000119596
Salix brachista GWHAAZH00000008 1 CH_sbr_273 2 2 0.000189042
Simmondsia chinensis GWHAASQ00000016 1 CH_sci_65 3 3 0.000000217487
Sequoiadendron giganteum chr3 1 CH_sgi_1215 2 2 0.000292291
Sequoiadendron giganteum chr2 1 CH_sgi_1216 2 2 0.000292291
Sapria himalayana scaffold73_2239179 1 CH_shi_178 2 2 0.000171541
Theobroma cacao Chromosome_2 1 CH_tca_413 2 3 0.000659107
Citrus clementina scaffold_4 2 CH_ccl_291 2 2 0.0000820311
Citrullus lanatus CG_Chr09 2 CH_cla_115 2 2 0.0000887115
Cucumis sativus L. chr7 2 CH_csa_236 3 45 0.000148065
Fragaria x ananassa Fvb4-1 2 CH_fan_178 3 4 0.00000058749
Fragaria vesca Fvb4 2 CH_fve_338 2 2 0.00017673
Glycine max Gm18 2 CH_gma_577 2 3 0.000683172
Glycine max Gm08 2 CH_gma_578 2 3 0.000683172
Lotus japonicus chr6 2 CH_lja_258 2 2 0.0000715077
Punica granatum NC_045133.1 2 CH_pgr_273 2 2 0.000225107
Pisum sativum chr5LG3 2 CH_psa_215 2 2 0.0000521635
Phaseolus vulgaris Chr06 2 CH_pvu_267 2 2 0.0000734727
Rosa chinensis RcHm_v2.0_Chr4 2 CH_rch_578 2 2 0.000119596
Salix brachista GWHAAZH00000008 2 CH_sbr_273 2 2 0.000189042
Simmondsia chinensis GWHAASQ00000016 2 CH_sci_65 3 3 0.000000217487
Sequoiadendron giganteum chr3 2 CH_sgi_1215 2 2 0.000292291
Sequoiadendron giganteum chr2 2 CH_sgi_1216 2 2 0.000292291
Sapria himalayana scaffold73_2239179 2 CH_shi_178 2 2 0.000171541
Theobroma cacao Chromosome_2 2 CH_tca_413 2 3 0.000659107

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001