Functional clusters

Information

  • Type MapMan
  • Description RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.ubiquitin ligase component PQT3/MPE1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 1 CH_arhy_446 3 12 0.0000650047
Hydrangea macrophylla Hma1.2p1_0316F.1 1 CH_hma_186 2 2 0.000111086
Magnolia biondii Chr05 1 CH_mbi_640 2 2 0.000728491
Manihot esculenta Chromosome16 1 CH_mes_408 2 2 0.000366379
Sapria himalayana scaffold4_21100006 1 CH_shi_87 2 2 0.0000571804
Vanilla planifolia CM028150.1 1 CH_vpl_236 2 3 0.000221656
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 2 CH_arhy_446 3 12 0.0000650047
Hydrangea macrophylla Hma1.2p1_0316F.1 2 CH_hma_186 2 2 0.000111086
Magnolia biondii Chr05 2 CH_mbi_640 2 2 0.000728491
Manihot esculenta Chromosome16 2 CH_mes_408 2 2 0.000366379
Sapria himalayana scaffold4_21100006 2 CH_shi_87 2 2 0.0000571804
Vanilla planifolia CM028150.1 2 CH_vpl_236 2 3 0.000221656

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001