Functional clusters

Information

  • Type MapMan
  • Description RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.Intron-Lariat Spliceosome (ILS) complex.component STIPL

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Citrus clementina scaffold_2 1 CH_ccl_443 2 2 0.000492187
Davidia involucrata GWHABJS00000001 1 CH_din_330 2 2 0.000150038
Lonicera japonica GWHAAZE00000009 1 CH_lonja_313 3 9 0.0000158056
Lactuca sativa Lsat_1_v8_lg_9 1 CH_lsa_328 2 2 0.0000514007
Quercus lobata 3 1 CH_qlo_933 2 3 0.00046464
Simmondsia chinensis GWHAASQ00000009 1 CH_sci_82 3 5 0.0000010872
Vanilla planifolia CM028157.1 1 CH_vpl_164 2 2 0.000073888
Citrus clementina scaffold_2 2 CH_ccl_443 2 2 0.000492187
Davidia involucrata GWHABJS00000001 2 CH_din_330 2 2 0.000150038
Lonicera japonica GWHAAZE00000009 2 CH_lonja_313 3 9 0.0000158056
Lactuca sativa Lsat_1_v8_lg_9 2 CH_lsa_328 2 2 0.0000514007
Quercus lobata 3 2 CH_qlo_933 2 3 0.00046464
Simmondsia chinensis GWHAASQ00000009 2 CH_sci_82 3 5 0.0000010872
Vanilla planifolia CM028157.1 2 CH_vpl_164 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001