Functional clusters

Information

  • Type MapMan
  • Description RNA processing.pre-mRNA splicing.U12-type-intron-specific minor spliceosome.U11/U12 small nuclear ribonucleoprotein particle (snRNP).protein factor (U11/U12-65K)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Magnolia biondii Chr05 1 CH_mbi_660 2 4 0.000874119
Sapria himalayana scaffold14_12630789 1 CH_shi_41 3 6 0.0000000980824
Selenicereus undatus Scaffold_33676 1 CH_sun_179 2 3 0.000217984
Trifolium pratense Tp57577_TGAC_v2_LG6 1 CH_tpr_219 2 2 0.0000756974
Vigna mungo CM024070.1 1 CH_vmu_187 2 2 0.0000646141
Vitis vinifera chr5 1 CH_vvi_329 2 2 0.000228189
Magnolia biondii Chr05 2 CH_mbi_660 2 4 0.000874119
Sapria himalayana scaffold14_12630789 2 CH_shi_41 3 6 0.0000000980824
Selenicereus undatus Scaffold_33676 2 CH_sun_179 2 3 0.000217984
Trifolium pratense Tp57577_TGAC_v2_LG6 2 CH_tpr_219 2 2 0.0000756974
Vigna mungo CM024070.1 2 CH_vmu_187 2 2 0.0000646141
Vitis vinifera chr5 2 CH_vvi_329 2 2 0.000228189

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001