Functional clusters

Information

  • Type MapMan
  • Description RNA processing.pre-mRNA splicing.U12-type-intron-specific minor spliceosome.U11/U12 small nuclear ribonucleoprotein particle (snRNP).RNA chaperone (U11/U12-31K)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR07 1 CH_aox_61 3 3 0.0000000385927
Cucumis sativus L. scaffold31 1 CH_csa_177 3 10 0.0000250629
Gossypium raimondii Chr09 1 CH_gra_434 2 6 0.000804074
Pisum sativum chr4LG4 1 CH_psa_14 10 71 1.82237e-16
Pisum sativum chr4LG4 1 CH_psa_8 11 78 1.51944e-18
Theobroma cacao Chromosome_10 1 CH_tca_319 2 3 0.000219708
Aquilegia oxysepala CHR07 2 CH_aox_61 3 3 0.0000000385927
Cucumis sativus L. scaffold31 2 CH_csa_177 3 10 0.0000250629
Gossypium raimondii Chr09 2 CH_gra_434 2 6 0.000804074
Pisum sativum chr4LG4 2 CH_psa_14 10 71 1.82237e-16
Pisum sativum chr4LG4 2 CH_psa_8 11 78 1.51944e-18
Theobroma cacao Chromosome_10 2 CH_tca_319 2 3 0.000219708

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001