Functional clusters
Information
- Type MapMan
- Description RNA processing.pre-mRNA splicing.U12-type-intron-specific minor spliceosome.U11/U12 small nuclear ribonucleoprotein particle (snRNP).RNA chaperone (U11/U12-31K)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Aquilegia oxysepala | CHR07 | 1 | CH_aox_61 | 3 | 3 | 0.0000000385927 |
Cucumis sativus L. | scaffold31 | 1 | CH_csa_177 | 3 | 10 | 0.0000250629 |
Gossypium raimondii | Chr09 | 1 | CH_gra_434 | 2 | 6 | 0.000804074 |
Pisum sativum | chr4LG4 | 1 | CH_psa_14 | 10 | 71 | 1.82237e-16 |
Pisum sativum | chr4LG4 | 1 | CH_psa_8 | 11 | 78 | 1.51944e-18 |
Theobroma cacao | Chromosome_10 | 1 | CH_tca_319 | 2 | 3 | 0.000219708 |
Aquilegia oxysepala | CHR07 | 2 | CH_aox_61 | 3 | 3 | 0.0000000385927 |
Cucumis sativus L. | scaffold31 | 2 | CH_csa_177 | 3 | 10 | 0.0000250629 |
Gossypium raimondii | Chr09 | 2 | CH_gra_434 | 2 | 6 | 0.000804074 |
Pisum sativum | chr4LG4 | 2 | CH_psa_14 | 10 | 71 | 1.82237e-16 |
Pisum sativum | chr4LG4 | 2 | CH_psa_8 | 11 | 78 | 1.51944e-18 |
Theobroma cacao | Chromosome_10 | 2 | CH_tca_319 | 2 | 3 | 0.000219708 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |