Functional clusters
Information
- Type MapMan
- Description RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).protein factor (PRPF8/SUS2)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Ceratophyllum demersum | 1 | 1 | CH_cde_165 | 2 | 2 | 0.000236939 |
Davidia involucrata | GWHABJS00000019 | 1 | CH_din_329 | 2 | 2 | 0.000150038 |
Gossypium hirsutum | A05 | 1 | CH_ghi_199 | 3 | 3 | 0.0000000213895 |
Sequoiadendron giganteum | chr3 | 1 | CH_sgi_806 | 2 | 2 | 0.0000487151 |
Utricularia gibba | unitig_747 | 1 | CH_ugi_142 | 2 | 2 | 0.0000734592 |
Ceratophyllum demersum | 1 | 2 | CH_cde_165 | 2 | 2 | 0.000236939 |
Davidia involucrata | GWHABJS00000019 | 2 | CH_din_329 | 2 | 2 | 0.000150038 |
Gossypium hirsutum | A05 | 2 | CH_ghi_199 | 3 | 3 | 0.0000000213895 |
Sequoiadendron giganteum | chr3 | 2 | CH_sgi_806 | 2 | 2 | 0.0000487151 |
Utricularia gibba | unitig_747 | 2 | CH_ugi_142 | 2 | 2 | 0.0000734592 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |