Functional clusters
Information
- Type MapMan
- Description RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).protein factor (PRPF4)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Camellia sinensis var. sinensis | Chr10 | 1 | CH_camsi_612 | 2 | 3 | 0.000137561 |
| Oryza sativa ssp. japonica | chr03 | 1 | CH_osa_254 | 2 | 3 | 0.000158433 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 1 | CH_rch_363 | 3 | 18 | 0.00000194469 |
| Camellia sinensis var. sinensis | Chr10 | 2 | CH_camsi_612 | 2 | 3 | 0.000137561 |
| Oryza sativa ssp. japonica | chr03 | 2 | CH_osa_254 | 2 | 3 | 0.000158433 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 2 | CH_rch_363 | 3 | 18 | 0.00000194469 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |