Functional clusters

Information

  • Type MapMan
  • Description RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).pre-mRNA splicing factor (PHF5)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr4 1 CH_acertr_488 2 2 0.000422982
Daucus carota DCARv2_Chr2 1 CH_dca_290 2 2 0.000191333
Gossypium raimondii Chr13 1 CH_gra_346 2 2 0.000321664
Malus domestica Chr12 1 CH_mdo_522 3 13 0.000176155
Populus trichocarpa Chr09 1 CH_ptr_487 2 2 0.000578001
Quercus lobata 4 1 CH_qlo_181 6 52 0.00000000000116396
Salix brachista GWHAAZH00000016 1 CH_sbr_327 2 2 0.000378084
Acer truncatum chr4 2 CH_acertr_488 2 2 0.000422982
Daucus carota DCARv2_Chr2 2 CH_dca_290 2 2 0.000191333
Gossypium hirsutum A13 2 CH_ghi_773 2 2 0.000560733
Gossypium raimondii Chr13 2 CH_gra_346 2 2 0.000321664
Malus domestica Chr12 2 CH_mdo_522 3 13 0.000176155
Populus trichocarpa Chr09 2 CH_ptr_487 2 2 0.000578001
Quercus lobata 4 2 CH_qlo_181 6 52 0.00000000000116396
Salix brachista GWHAAZH00000016 2 CH_sbr_327 2 2 0.000378084

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001