Functional clusters
Information
- Type MapMan
- Description RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.component SF3B1
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr7 | 1 | CH_acertr_485 | 2 | 2 | 0.000422982 |
Brassica carinata | ChrB04 | 1 | CH_bca_523 | 2 | 2 | 0.0000213764 |
Carya illinoinensis | Chr16 | 1 | CH_cil_340 | 2 | 2 | 0.0000619828 |
Malus domestica | Chr17 | 1 | CH_mdo_374 | 2 | 2 | 0.0000379212 |
Vanilla planifolia | CM028154.1 | 1 | CH_vpl_351 | 3 | 51 | 0.000680066 |
Acer truncatum | chr7 | 2 | CH_acertr_485 | 2 | 2 | 0.000422982 |
Brassica carinata | ChrB04 | 2 | CH_bca_523 | 2 | 2 | 0.0000213764 |
Carya illinoinensis | Chr16 | 2 | CH_cil_340 | 2 | 2 | 0.0000619828 |
Malus domestica | Chr17 | 2 | CH_mdo_374 | 2 | 2 | 0.0000379212 |
Vanilla planifolia | CM028154.1 | 2 | CH_vpl_351 | 3 | 51 | 0.000680066 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |