Functional clusters

Information

  • Type MapMan
  • Description RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.component SF3B1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr7 1 CH_acertr_485 2 2 0.000422982
Brassica carinata ChrB04 1 CH_bca_523 2 2 0.0000213764
Carya illinoinensis Chr16 1 CH_cil_340 2 2 0.0000619828
Malus domestica Chr17 1 CH_mdo_374 2 2 0.0000379212
Vanilla planifolia CM028154.1 1 CH_vpl_351 3 51 0.000680066
Acer truncatum chr7 2 CH_acertr_485 2 2 0.000422982
Brassica carinata ChrB04 2 CH_bca_523 2 2 0.0000213764
Carya illinoinensis Chr16 2 CH_cil_340 2 2 0.0000619828
Malus domestica Chr17 2 CH_mdo_374 2 2 0.0000379212
Vanilla planifolia CM028154.1 2 CH_vpl_351 3 51 0.000680066

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001