Functional clusters

Information

  • Type MapMan
  • Description RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor heterodimer.small subunit U2AF1/U2AF35

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr6 1 CH_ccan_240 2 2 0.000119249
Olea europaea chr1 1 CH_oeu_395 2 2 0.000800683
Pisum sativum chr6LG2 1 CH_psa_322 2 2 0.000312981
Phaseolus vulgaris Chr05 1 CH_pvu_392 2 2 0.000440836
Theobroma cacao Chromosome_9 1 CH_tca_331 2 2 0.000219716
Tripterygium wilfordii NC_052236.1 1 CH_twi_277 2 2 0.000557507
Vigna mungo CM024079.1 1 CH_vmu_324 2 2 0.000387685
Coffea canephora chr6 2 CH_ccan_240 2 2 0.000119249
Olea europaea chr1 2 CH_oeu_395 2 2 0.000800683
Pisum sativum chr6LG2 2 CH_psa_322 2 2 0.000312981
Phaseolus vulgaris Chr05 2 CH_pvu_392 2 2 0.000440836
Theobroma cacao Chromosome_9 2 CH_tca_331 2 2 0.000219716
Tripterygium wilfordii NC_052236.1 2 CH_twi_277 2 2 0.000557507
Vigna mungo CM024079.1 2 CH_vmu_324 2 2 0.000387685

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001