Functional clusters

Information

  • Type MapMan
  • Description RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).accessory protein activities.pre-mRNA splicing factor (RBM25)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Fragaria x ananassa Fvb4-3 1 CH_fan_561 2 3 0.000555093
Fragaria vesca Fvb4 1 CH_fve_256 2 2 0.0000589102
Tarenaya hassleriana NW_010960187.1 1 CH_tha_102 2 2 0.000069847
Vanilla planifolia CM028158.1 1 CH_vpl_147 2 2 0.000073888
Fragaria x ananassa Fvb4-3 2 CH_fan_561 2 3 0.000555093
Fragaria vesca Fvb4 2 CH_fve_256 2 2 0.0000589102
Tarenaya hassleriana NW_010960187.1 2 CH_tha_102 2 2 0.000069847
Vanilla planifolia CM028158.1 2 CH_vpl_147 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001