Functional clusters

Information

  • Type MapMan
  • Description RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).protein factor (U1C)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB05 1 CH_bca_848 2 2 0.000320646
Chenopodium quinoa C_Quinoa_Scaffold_1534 1 CH_cqu_354 2 2 0.000142146
Davidia involucrata GWHABJS00000007 1 CH_din_404 2 5 0.00030006
Hydrangea macrophylla Hma1.2p1_0643F.1 1 CH_hma_12 4 4 0.00000000000411317
Brassica carinata ChrB05 2 CH_bca_848 2 2 0.000320646
Chenopodium quinoa C_Quinoa_Scaffold_1534 2 CH_cqu_354 2 2 0.000142146
Davidia involucrata GWHABJS00000007 2 CH_din_404 2 5 0.00030006
Hydrangea macrophylla Hma1.2p1_0643F.1 2 CH_hma_12 4 4 0.00000000000411317

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001