Functional clusters

Information

  • Type MapMan
  • Description RNA processing.organelle machinery.pre-mRNA splicing.mitochondrial RNA splicing.group-II intron splicing.type-II splicing factor (nMAT3/4)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Papaver somniferum NC_039362.1 1 CH_pso_514 2 3 0.000202706
Quercus lobata 7 1 CH_qlo_713 3 18 0.0000651721
Rhododendron simsii chr10 1 CH_rsi_480 2 2 0.000387184
Sequoiadendron giganteum chr1 1 CH_sgi_1058 2 2 0.000146145
Papaver somniferum NC_039362.1 2 CH_pso_514 2 3 0.000202706
Quercus lobata 7 2 CH_qlo_713 3 18 0.0000651721
Rhododendron simsii chr10 2 CH_rsi_480 2 2 0.000387184
Sequoiadendron giganteum chr1 2 CH_sgi_1058 2 2 0.000146145

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001